<> "The repository administrator has not yet configured an RDF license."^^ . <> . . "Standards and Tools for Model Exchange and Analysis in Systems Biology"^^ . "This work is about standards in systems biology and about support for these standards in systems biology software tools. The work is divided into three sections. The first section describes an extension to the systems biology markup language (SBML) for the storage of graphical information on biochemical reaction networks. In the first part it explains the history of the extension, what it is about and what it can be used for and in the second part it details implementations of the extension in the form of several different software tools. The second section of this work deals with the Systems Biology Markup Language (SBML) standard and the different aspects of its support in the COPASI software tool. COPASI is a tool for the simulation and analysis of biochemical reaction networks and it uses SBML files as an exchange format for these reaction network models. This section highlights the different aspects of the implementation of the SBML standard as well as the extension to the SBML standard that is described in the first section of this work. Additionally this section describes how the functionality of COPASI, which is written in the C++ programming language, has been made available to developers using other programming languages like Java or Python and how this functionality is used in different systems biology computer programs around the world. The third section of this thesis discusses methods for the normalization and comparison of mathematical expressions and the implementation of these methods in the form of a computer program. This program is used to analyze the mathematical expressions in all models of the current release of the BioModels database. At several occasions in this text, it is demonstrated how the methods and tools described in these three sections can make a valuable contribution to research in systems biology. "^^ . "2011" . . . . . . . . "Ralph"^^ . "Gauges"^^ . "Ralph Gauges"^^ . . . . . . "Standards and Tools for Model Exchange and Analysis in Systems Biology (PDF)"^^ . . . "dissertation_gauges_20110712.pdf"^^ . . . "Standards and Tools for Model Exchange and Analysis in Systems Biology (Other)"^^ . . . . . . "indexcodes.txt"^^ . . . "Standards and Tools for Model Exchange and Analysis in Systems Biology (Other)"^^ . . . . . . "lightbox.jpg"^^ . . . "Standards and Tools for Model Exchange and Analysis in Systems Biology (Other)"^^ . . . . . . "preview.jpg"^^ . . . "Standards and Tools for Model Exchange and Analysis in Systems Biology (Other)"^^ . . . . . . "medium.jpg"^^ . . . "Standards and Tools for Model Exchange and Analysis in Systems Biology (Other)"^^ . . . . . . "small.jpg"^^ . . "HTML Summary of #12206 \n\nStandards and Tools for Model Exchange and Analysis in Systems Biology\n\n" . "text/html" . . . "570 Biowissenschaften, Biologie"@de . "570 Life sciences"@en . .